All Categories

History

  1. Metoree
  2. Protein 3D structure information database system PSILO (Molsis Co., Ltd.)

Protein 3D structure information database system PSILO
Molsis Co., Ltd.

About This Product

Overview

■PSILO (Protein SILO)

PSILO, manufactured by CCG, Canada, is a database system for structural information on biopolymers and protein-ligand complexes. It integrates dispersed protein structure data, including public and in-house data, and can be easily accessed through a web-based interface. You can perform searches using 3D structure information, such as similar pocket searches and 3D interaction searches. function

■Search

・Fast text search ・Protein/antibody amino acid sequence search ・Similar pocket structure search ・3D interaction search ・Compound partial structure/similar structure search

■Superposition of protein 3D structures

・Superposition of the entire protein 3D structure ・Superposition based on pocket similarity ・Superposition by ligand structure ・Comparison of interactions in superimposed structures ・Loading the superimposed structure into MOE

■Data display

・2D/3D display of ligand binding site ・Drawing an electron density map ・Annotation of protein functional sites ・Amino acid sequence annotation

■Data update and version control

・Automatic update of PDB data ・Easy registration of in-house data ・Annotation of protein functional sites ・Comment forum

  • Product

    Protein 3D structure information database system PSILO

Share this product


100+ people viewing

Free
Get started with our free quotation service - no cost, no obligation.

No Phone Required
We respect your privacy. You can receive quotes without sharing your phone number.

1 Models of Protein 3D structure information database system PSILO

Image Part Number Price (excluding tax) Various libraries Operating environment OS Program execution environment Network environment Database server Storage Web server Application Web browser RAM CPU

PSILO

Available upon quote

Libcurl/libxml2/OpenLDAP/OpenSSL/
Zlib/JSMol 14.30.00/NGL Viewer 2.0.0-dev37/JQuery 1.10/ etc.

64bit Linux server

PHP 7.3.3 or later

High-speed and highly reliable network environment and PDB data download environment using FTP

MySQL 8.0.16

4RB or more free space. Redundant configurations such as RAID, LVM, ZFS, etc. When storing in-house data or AlphaFold data, appropriate additional storage is required. SSD recommended.

Apache 2.4.46 or higher, or a web server that supports PHP 7 documentation.

MOE/batch 1 token or more

Chrome, Edge, Firefox, Safari, etc.
(Compatible with HTML5/CSS3)

4GB or more per core, 64GB or more in total

Intel Xeon 3.0 GHz multi-core 16 cores

About Company Handling This Product

Molsis Co., Ltd.

  • Japan

This is the version of our website addressed to speakers of English in the United States. If you are a resident of another country, please select the appropriate version of Metoree for your country in the drop-down menu.

Copyright © 2025 Metoree