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  2. Chemistry/Computational Chemistry/Bio DNA sequence assembly and alignment CodonCode Aligner (Hulinks Co., Ltd.)

Chemistry/Computational Chemistry/Bio DNA sequence assembly and alignment CodonCode Aligner
Hulinks Co., Ltd.

About This Product

■DNA sequence assembly and alignment

CodonCode Aligner is a program for Windows and macOS that helps you with DNA barcoding, sequence assembly and contig editing, and mutation detection. It has a friendly and easy-to-understand user interface, while also providing full support for sequence quality scoring that is compatible with Phred-Phrap.

■What you can do with CodonCode Aligner

・Reading sequences from text files ・From ABI file, SCF file, FASTQ file ・Load sequence ・End Clip function (a function that cuts the end of a low-quality sequence) ・Vector trimming ・Contig assembly ・Alignment to reference sequence ・Align each contig while maintaining links to traces ・Assemble and arrange groups based on sample name ・Search for heterozygous mutations ・Analysis of heterozygous insertions and deletions ・Primer design ・Navigation function between user-defined features ・Generation of phylogenetic tree and restriction map ・Run Phred and Phrap directly from your Aligner project ・Output of sequences and features ・See difference table and protein translation ・Search enzymes for RFLP analysis and create virtual gels Analyze methylated sequences and display raw trace data ・Planning and visualization of restricted cloning steps ・Separate alleles ・Definition of regions of interest (features): low-quality consensus regions, etc. ・Assembling bacterial genomes and small-scale NGS sequencing projects ・Planning a cloning experiment using virtual restriction cloning ・Virtual multi-fragment cloning using Gibson assembly CodonCode Aligner lets you take full advantage of the latest algorithms for base calling and sequence assembly without having to learn difficult command line options or Perl programming.

  • Product

    Chemistry/Computational Chemistry/Bio DNA sequence assembly and alignment CodonCode Aligner

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1 Models of Chemistry/Computational Chemistry/Bio DNA sequence assembly and alignment CodonCode Aligner

Image Part Number Price (excluding tax) Operating environment

CodonCode Aligner 12 Single User (general use)

$ 2,099.50〜

Mac OS X 10.10 or later; Sequoia (15) compatible
Windows 10 or later recommended; Windows 11 compatible

About Company Handling This Product

Hulinks Co., Ltd.

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